# hmmsearch :: search profile(s) against a sequence database # HMMER 3.0 (March 2010); http://hmmer.org/ # Copyright (C) 2010 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: Terpene_synth_N.hmm # target sequence database: Selaginella-moellendorffii.faa # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Terpene_synth_N-terminal [M=192] Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.1e-55 186.8 0.0 3e-54 184.5 0.0 2.3 1 XP_002960350.1 kaurene synthase [Selaginella moellendorffii] 9.2e-55 186.2 0.0 4.3e-54 184.0 0.0 2.2 1 XP_002967366.1 copalyl diphosphate synthase [Selaginella moe 1.4e-54 185.6 0.0 5.4e-54 183.7 0.0 2.1 1 XP_002960349.1 copalyl diphosphate synthase [Selaginella moe 1.7e-54 185.4 0.0 1.4e-53 182.4 0.0 2.5 2 XP_002967364.1 hypothetical protein SELMODRAFT_144572 [Selag 8.3e-51 173.3 0.0 3.1e-50 171.5 0.0 1.9 2 XP_002964745.1 kaurene synthase [Selaginella moellendorffii] 1.2e-50 172.8 0.0 3.2e-50 171.4 0.0 1.8 2 XP_002962163.1 kaurene synthase, partial [Selaginella moelle 3.9e-48 164.6 0.0 8.6e-48 163.5 0.0 1.6 1 XP_002980657.1 hypothetical protein SELMODRAFT_112927 [Selag 4.6e-48 164.4 0.0 1e-47 163.3 0.0 1.6 1 XP_002984563.1 hypothetical protein SELMODRAFT_120716 [Selag 3.6e-47 161.5 0.1 1.8e-46 159.2 0.0 2.1 2 XP_002986560.1 hypothetical protein SELMODRAFT_124329 [Selag 3.1e-46 158.4 0.1 7.7e-46 157.1 0.1 1.7 1 XP_002966059.1 hypothetical protein SELMODRAFT_439448 [Selag 9.1e-46 156.9 0.0 2.4e-45 155.5 0.0 1.8 1 XP_002966056.1 hypothetical protein SELMODRAFT_407280 [Selag 1.6e-45 156.1 0.1 3.1e-45 155.2 0.0 1.5 1 XP_002971433.1 hypothetical protein SELMODRAFT_412135 [Selag 2.6e-45 155.4 0.1 6.4e-45 154.1 0.0 1.7 1 XP_002971436.1 hypothetical protein SELMODRAFT_412139 [Selag 1e-44 153.5 0.0 2.5e-44 152.2 0.0 1.7 1 XP_002988606.1 hypothetical protein SELMODRAFT_427242 [Selag 2.8e-44 152.0 0.0 5.9e-44 151.0 0.0 1.6 1 XP_002979298.1 hypothetical protein SELMODRAFT_418910 [Selag 2.9e-44 152.0 0.0 7.3e-44 150.7 0.0 1.7 2 XP_002967117.1 terpene synthase, partial [Selaginella moelle 1.1e-43 150.1 0.1 2.7e-43 148.9 0.0 1.7 1 XP_002971439.1 hypothetical protein SELMODRAFT_412143 [Selag 1.9e-43 149.3 0.0 4.7e-43 148.1 0.0 1.7 1 XP_002960234.1 terpene synthase [Selaginella moellendorffii] 7e-21 75.7 0.1 1.9e-20 74.3 0.0 1.7 1 XP_002964746.1 ent-kaurene synthase [Selaginella moellendorf 1.5e-20 74.7 0.0 3.8e-20 73.3 0.0 1.7 1 XP_002961679.1 hypothetical protein SELMODRAFT_403761 [Selag 5.7e-16 59.7 0.0 7.4e-16 59.3 0.0 1.1 1 XP_002967480.1 hypothetical protein SELMODRAFT_86646, partia 1.9e-14 54.7 0.0 7.6e-14 52.8 0.0 2.0 2 XP_002961681.1 terpene synthase [Selaginella moellendorffii] 8.1e-13 49.4 0.0 8.1e-13 49.4 0.0 1.0 1 XP_002961682.1 hypothetical protein SELMODRAFT_77019 [Selagi 1.1e-11 45.7 0.1 1.2e-11 45.6 0.0 1.0 1 XP_002964748.1 hypothetical protein SELMODRAFT_82917, partia 5.5e-05 23.9 0.0 0.00022 21.9 0.0 2.0 2 XP_002964747.1 hypothetical protein SELMODRAFT_406216 [Selag ------ inclusion threshold ------ 0.29 11.7 0.0 0.43 11.2 0.0 1.2 1 XP_002986818.1 hypothetical protein SELMODRAFT_158239 [Selag 0.29 11.7 0.0 0.43 11.2 0.0 1.2 1 XP_002969297.1 hypothetical protein SELMODRAFT_146341 [Selag Domain annotation for each sequence (and alignments): >> XP_002960350.1 kaurene synthase [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 184.5 0.0 2.4e-57 3e-54 1 192 [] 172 378 .. 172 378 .. 0.87 Alignments for each domain: == domain 1 score: 184.5 bits; conditional E-value: 2.4e-57 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw++v++l+ +gsl+ sp++ta+al+ ++++ l ++l+k avp+vyp+dl+e+L+++d+LqrLGis++F++eI XP_002960350.1 172 DWDKVIKLQSPDGSLLFSPASTACALM-HTGNekclqyL----NNLVKrfncAVPNVYPVDLFEHLWIVDRLQRLGISRYFTQEI 251 7**********************9999.66666885555....666656666********************************* PP ---------------------.....-----------------------------------------....-------------- CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshls 151 k++Ld++yr+w++ k+ ++++ d +++++aFrLLR hGyd+s+d+Fk F++ ++ f ++s + v+g+++LY+As+++ XP_002960350.1 252 KSALDYVYRYWTD-KGIAWARgspvqDADDTSMAFRLLRSHGYDISPDAFKTFQEGDS-F-VCFSGQagqaVTGMYNLYRASQVM 333 ************9.7788888899******************************8888.5.4666333678************** PP --------------------------.--..---.---------- CS Terpene_synth_N-terminal 152 tegeeiLeealsFtrkhLkeslseel.sd..esp.nlaeeVehaL 192 ++ge+iLeea sF+rk+L+ + +e++ d +++ +l eVe aL XP_002960350.1 334 FPGETILEEAGSFARKFLEGKRQENQlYDkwIISkDLPGEVEFAL 378 ******************776555554446855558*****9997 PP >> XP_002967366.1 copalyl diphosphate synthase [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 184.0 0.0 3.4e-57 4.3e-54 1 192 [] 256 462 .. 256 462 .. 0.87 Alignments for each domain: == domain 1 score: 184.0 bits; conditional E-value: 3.4e-57 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw++v++l+ +gsl+ sp++ta+al+ ++++ l ++l+k avp+vyp+dl+e+L+++d+LqrLGis++F++eI XP_002967366.1 256 DWDKVIKLQSPDGSLLFSPASTACALM-HTGNekclqyL----NNLVKrfncAVPNVYPVDLFEHLWIVDRLQRLGISRYFTQEI 335 7**********************9999.66666885555....666656666********************************* PP ---------------------.....-----------------------------------------....-------------- CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshls 151 k++Ld++yr+w++ k+ ++++ d +++++aFrLLR hGyd+s+d+Fk F++ ++ f ++s + v+g+++LY+As+++ XP_002967366.1 336 KSALDYVYRYWTD-KGIAWARgspvqDADDTSMAFRLLRSHGYDISPDAFKTFQEGDS-F-VCFSGQagqaVTGMYNLYRASQVM 417 ************9.7788888899******************************8888.5.4666333678************** PP --------------------------.--..---.---------- CS Terpene_synth_N-terminal 152 tegeeiLeealsFtrkhLkeslseel.sd..esp.nlaeeVehaL 192 ++ge+iLeea sF+rk+L+ + +e++ d +++ +l eVe aL XP_002967366.1 418 FPGETILEEAGSFARKFLEGKRQENQlYDkwIISkDLPGEVEFAL 462 ******************776555554446855558*****9997 PP >> XP_002960349.1 copalyl diphosphate synthase [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.7 0.0 4.2e-57 5.4e-54 1 192 [] 378 584 .. 378 584 .. 0.87 Alignments for each domain: == domain 1 score: 183.7 bits; conditional E-value: 4.2e-57 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw++v++l+ +gsl+ sp++ta+al+ ++++ l ++l+k avp+vyp+dl+e+L+++d+LqrLGis++F++eI XP_002960349.1 378 DWDKVIKLQSPDGSLLFSPASTACALM-HTGNekclqyL----NNLVKrfncAVPNVYPVDLFEHLWIVDRLQRLGISRYFTQEI 457 7**********************9999.66666885555....666656666********************************* PP ---------------------.....-----------------------------------------....-------------- CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshls 151 k++Ld++yr+w++ k+ ++++ d +++++aFrLLR hGyd+s+d+Fk F++ ++ f ++s + v+g+++LY+As+++ XP_002960349.1 458 KSALDYVYRYWTD-KGIAWARgspvqDADDTSMAFRLLRSHGYDISPDAFKTFQEGDS-F-VCFSGQagqaVTGMYNLYRASQVM 539 ************9.7788888899******************************8888.5.4666333678************** PP --------------------------.--..---.---------- CS Terpene_synth_N-terminal 152 tegeeiLeealsFtrkhLkeslseel.sd..esp.nlaeeVehaL 192 ++ge+iLeea sF+rk+L+ + +e++ d +++ +l eVe aL XP_002960349.1 540 FPGETILEEAGSFARKFLEGKRQENQlYDkwIISkDLPGEVEFAL 584 ******************776555554446855558*****9997 PP >> XP_002967364.1 hypothetical protein SELMODRAFT_144572 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.9 0.0 1.7 2.2e+03 153 176 .. 78 102 .. 72 120 .. 0.74 2 ! 182.4 0.0 1.1e-56 1.4e-53 1 192 [] 172 378 .. 172 378 .. 0.87 Alignments for each domain: == domain 1 score: -0.9 bits; conditional E-value: 1.7 -------------------.----- CS Terpene_synth_N-terminal 153 egeeiLeealsFtrkhLke.slsee 176 +g++i+++al+F rk + e +++++ XP_002967364.1 78 TGDKIIHKALEFIRKTMPEmEMEDS 102 6899***********9977333332 PP == domain 2 score: 182.4 bits; conditional E-value: 1.1e-56 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw++v++l+ +gsl+ sp++ta+al+ ++++ l ++l+k avp yp+dl+e+L+++d+LqrLGis++F++eI XP_002967364.1 172 DWDKVIKLQSPDGSLLFSPASTACALM-HTGNekclqyL----NNLVKrfncAVPGGYPVDLFEHLWVVDRLQRLGISRYFTQEI 251 7**********************9999.66666885555....666656666********************************* PP ---------------------.....-----------------------------------------....-------------- CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshls 151 k++Ld++yr+w++ k+ ++++ d +++++aFrLLR hGyd+s+d+Fk+F++ ++ f ++s + v+g+++LY+As+l+ XP_002967364.1 252 KSALDYVYRYWTD-KGIAWARgspvqDADDTSMAFRLLRSHGYDISPDAFKNFQEGDS-F-VCFSGQagqaVTGMYNLYRASQLM 333 ************9.7788888899******************************8888.5.4666333678************** PP --------------------.--------..---.---------- CS Terpene_synth_N-terminal 152 tegeeiLeealsFtrkhLke.slseelsd..esp.nlaeeVehaL 192 ++ge+iLeea sF+rk+L+ + +++l d +++ +l eVe aL XP_002967364.1 334 FPGETILEEAGSFARKFLEGkRRENQLYDkwIISkDLPGEVEFAL 378 ******************874545555445855559*****9997 PP >> XP_002964745.1 kaurene synthase [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.7 0.0 2.9 3.7e+03 32 63 .. 55 81 .. 42 83 .. 0.62 2 ! 171.5 0.0 2.4e-53 3.1e-50 1 192 [] 254 463 .. 254 463 .. 0.88 Alignments for each domain: == domain 1 score: -1.7 bits; conditional E-value: 2.9 -------------------------------- CS Terpene_synth_N-terminal 32 klkeevrkllkavpavypkdleekLelidtLq 63 kl+ r+++ ++ ++ +++Lel+d++ XP_002964745.1 55 KLERITRSTV-----SEDVQRKRRLELVDAVR 81 3433333333.....234667799***99986 PP == domain 2 score: 171.5 bits; conditional E-value: 2.4e-53 --------------------------------...----------.....----------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek...lkeevrkllk.....avpavypkdleekLelidtLqrLGisyhFeeeIke 77 dw +v++l++++gsl++sps+ta+al+ +++ l + +++l+ avp++yp+dl+e+++++d+++rLGi+++F++eIk+ XP_002964745.1 254 DWHKVVKLQCSDGSLLSSPSSTACALM-YTGNekcL-QYLNNILErykdaAVPNTYPVDLFEHIWIVDRIERLGIARYFTREIKD 336 7**********************9999.44444763.66688888888999********************************** PP -------------------.....-----------------------------------------....---------------- CS Terpene_synth_N-terminal 78 iLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlste 153 +Ld++yr+w++ k+ ++++ d +++++ F +LR hGydvs dvFk+F++e+++ +++ + v+g+l LY+A++++++ XP_002964745.1 337 ALDYVYRNWTD-KGISWARgtpiqDGDDTSMGFMVLRSHGYDVSADVFKHFQHENEHGFFCFVGQvseaVTGMLDLYKATKVMFP 420 **********9.778888899*******************************99876557887555778**************** PP ------------------.--------...---.---------- CS Terpene_synth_N-terminal 154 geeiLeealsFtrkhLke.slseelsd...esp.nlaeeVehaL 192 g+ iL++a++Ftr++L e + ++el+d + +l eVe +L XP_002964745.1 421 GDVILQKARAFTRSFLDEkRRKGELNDkwvV-TkDLPGEVEFEL 463 ****************995555555666743.447999998776 PP >> XP_002962163.1 kaurene synthase, partial [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.0 0.0 7.1 9.1e+03 48 63 .. 73 88 .. 58 91 .. 0.64 2 ! 171.4 0.0 2.5e-53 3.2e-50 1 192 [] 262 471 .. 262 471 .. 0.88 Alignments for each domain: == domain 1 score: -3.0 bits; conditional E-value: 7.1 ---------------- CS Terpene_synth_N-terminal 48 ypkdleekLelidtLq 63 + ++ +++Lel+d++ XP_002962163.1 73 EDVKRKRRLELVDAVR 88 3355567899999875 PP == domain 2 score: 171.4 bits; conditional E-value: 2.5e-53 --------------------------------...----------.....----------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek...lkeevrkllk.....avpavypkdleekLelidtLqrLGisyhFeeeIke 77 dw +v++l++++gsl++sps+ta+al+ +++ l + +++l+ avp++yp+dl+e+++++d+++rLGi+++F++eIk+ XP_002962163.1 262 DWHKVVKLQCSDGSLLSSPSSTACALM-YTGNekcL-QYLNNILErykdaAVPNTYPVDLFEHIWIVDRIERLGIARYFTREIKD 344 7**********************9999.44444763.66688888888999********************************** PP -------------------.....-----------------------------------------....---------------- CS Terpene_synth_N-terminal 78 iLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlste 153 +Ld++yr+w++ k+ ++++ d +++++ F +LR hGydvs dvFk+F++e+++ +++ + v+g+l LY+A++++++ XP_002962163.1 345 ALDYVYRNWTD-KGISWARgtpiqDGDDTSMGFMVLRSHGYDVSADVFKHFQHENEHGFFCFVGQvseaVTGMLDLYKATKVMFP 428 **********9.778888899*******************************99876557887555778**************** PP ------------------.--------...---.---------- CS Terpene_synth_N-terminal 154 geeiLeealsFtrkhLke.slseelsd...esp.nlaeeVehaL 192 g+ iL++a++Ftr++L e + ++el+d + +l eVe +L XP_002962163.1 429 GDVILQKARAFTRSFLDEkRRKGELNDkwvV-TkDLPGEVEFEL 471 ****************995555555666743.447999998776 PP >> XP_002980657.1 hypothetical protein SELMODRAFT_112927 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 163.5 0.0 6.7e-51 8.6e-48 2 192 .] 180 385 .. 179 385 .. 0.91 Alignments for each domain: == domain 1 score: 163.5 bits; conditional E-value: 6.7e-51 -------------------------------......------------------------------------------------ CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaek......lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLd 80 w++++ + ++gs+++spsata+ ++ ++++ lk v+k+ ++vp++y dl+e+L+++dtL+rLGi+++F+ eIk+iLd XP_002980657.1 180 WEKILQFIGTDGSFLSSPSATACVYM-HTKDarcleyLKGVVKKVKNSVPCQYAIDLFERLWIVDTLERLGIDRYFQPEIKNILD 263 999999999*****************.88888****99999999999************************************** PP ----------------.....---------------------------------------.--...------------------- CS Terpene_synth_N-terminal 81 eiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls.ed...vkgllsLYeAshlstegee 156 ++y++w++kk+ + + d++++++ FrLLR hGy+v++dvF +F+ +e++f +++ e+ ++++++LY+As++++ +++ XP_002980657.1 264 YVYKYWSDKKGIGWGRdsylkDIDDTSMGFRLLRLHGYKVTPDVFLNFMSSEDKF-FCFPgESyhgASDIFNLYRASQVAFANDN 347 *********999998899***********************************99.9999655888999**************** PP -----------------------.---.---------- CS Terpene_synth_N-terminal 157 iLeealsFtrkhLkeslseelsd.esp.nlaeeVehaL 192 iL +a+++++k+L+++ + l++ + + n+ +eVe +L XP_002980657.1 348 ILTKAKNYAHKYLSQLDKAYLDKwSAKkNFFQEVEFEL 385 *************7644444444544458999998776 PP >> XP_002984563.1 hypothetical protein SELMODRAFT_120716 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 163.3 0.0 7.8e-51 1e-47 2 192 .] 180 385 .. 179 385 .. 0.91 Alignments for each domain: == domain 1 score: 163.3 bits; conditional E-value: 7.8e-51 -------------------------------......------------------------------------------------ CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaek......lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLd 80 w++++ + ++gs+++spsata+ ++ ++++ lk v+k+ ++vp++y dl+e+L+++dtL+rLGi+++F+ eIk+iLd XP_002984563.1 180 WEKILQFIGTDGSFLSSPSATACVYM-HTKDprcleyLKGVVKKVKNSVPCQYAIDLFERLWIVDTLERLGIDRYFQPEIKNILD 263 999999999*****************.99999****99999999999************************************** PP ----------------.....---------------------------------------.--...------------------- CS Terpene_synth_N-terminal 81 eiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls.ed...vkgllsLYeAshlstegee 156 ++y++w++kk+ + + d++++++ FrLLR hGy+v++dvF +F+ +e++f +++ e+ ++++++LY+As++++ +++ XP_002984563.1 264 YVYKYWSDKKGIGWGResylkDIDDTSMGFRLLRLHGYKVTPDVFLNFMSSEDKF-FCFPgESyhgASDIFNLYRASQVAFANDN 347 *********9999988999**********************************99.9999655888999**************** PP -----------------------.---.---------- CS Terpene_synth_N-terminal 157 iLeealsFtrkhLkeslseelsd.esp.nlaeeVehaL 192 iL +a+++++k+L+++ + l++ + + n+ +eVe +L XP_002984563.1 348 ILTKAKNYAHKYLSQLDKAYLDKwSAKkNFFQEVEFEL 385 *************7644444444544458999998776 PP >> XP_002986560.1 hypothetical protein SELMODRAFT_124329 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 159.2 0.0 1.4e-49 1.8e-46 1 192 [] 190 395 .. 190 395 .. 0.88 2 ? -0.9 0.0 1.6 2.1e+03 17 49 .. 682 714 .. 672 725 .. 0.66 Alignments for each domain: == domain 1 score: 159.2 bits; conditional E-value: 1.4e-49 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw++++ l+ ++gs+++sps+ta+ + ++++ l r+l+k avp+ yp d++e+L+++dtLqrLGi++ F++eI XP_002986560.1 190 DWTQILTLQSEDGSFLTSPSSTACVYL-HTKDekcltyL----RNLVKlhknAVPDFYPLDMFERLWVVDTLQRLGIDRFFKQEI 269 6**********************9999.66666886555....666666667********************************* PP ---------------------.....---------------------------------------.--...-------------- CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls.ed...vkgllsLYeAshls 151 keiLd++yr+w++kk+ +++ +l+ + FrLLR +Gydvs dvF +F+ ++g+f +++s e +++++sL++As+++ XP_002986560.1 270 KEILDYVYRYWDDKKGIGWARnvsvpELDCSGMGFRLLRLNGYDVSADVFTNFM-KDGKF-FCFSgERshgISDVFSLFRASQVA 352 **************9999998999******************************.67778.7888444788************** PP ----------------------------.---.---------- CS Terpene_synth_N-terminal 152 tegeeiLeealsFtrkhLkeslseelsd.esp.nlaeeVehaL 192 +++e iL++a+++++++L+++ ++ l++ + + +l+ eV+ +L XP_002986560.1 353 YPKEAILDQAHAYSQQYLSHLHDHGLDKwAFKnDLSGEVTFEL 395 ******************6655555455666667999998776 PP == domain 2 score: -0.9 bits; conditional E-value: 1.6 -------.-------------------------- CS Terpene_synth_N-terminal 17 nspsata.ealeeeaeklkeevrkllkavpavyp 49 +p++++ +a+++ +e l ++ ++l++ ++++ XP_002986560.1 682 YCPETSKeDAVKKVTEILDQKTKELIQVY-TQQS 714 45555554788878888999999999633.3233 PP >> XP_002966059.1 hypothetical protein SELMODRAFT_439448 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 157.1 0.1 6e-49 7.7e-46 1 192 [] 266 469 .. 266 469 .. 0.85 Alignments for each domain: == domain 1 score: 157.1 bits; conditional E-value: 6e-49 --------------------------------.....----------....---------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek.....lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIk 76 dw+++++l+ k+gs+f+sps+ta+ + + +k l ++ +k av+++yp dl+e L+++dt++rLGi+ F++eIk XP_002966059.1 266 DWQKILKLQSKDGSFFSSPSSTACVYLKTKDKkslqyL----QNAMKhqnyAVSCHYPIDLFESLRVVDTIERLGIDLFFRDEIK 346 7**********************988844444775555....4444455569********************************* PP --------------------.....-----------------------------------------....--------------- CS Terpene_synth_N-terminal 77 eiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlst 152 ++Ld++y+ w++ ++ +e+ d+e++A+aFr+LR+hGy+vs+d+F++F ++f+ ++ + v+++l+LY+As++ + XP_002966059.1 347 AVLDYLYSFWTN-EGIGWEStcivnDIEDTAMAFRILRMHGYSVSPDAFNQFWLPVDKFS-CFVGElshgVSAMLNLYRASQVDF 429 ***********9.667777778999****************************9998885.444333455*************** PP ------------------------------.---------- CS Terpene_synth_N-terminal 153 egeeiLeealsFtrkhLkeslseelsdesp.nlaeeVehaL 192 ++eeiL + ++++ +L + ++++++++++ nl+ eV+ +L XP_002966059.1 430 PNEEILTKTFKYSHDYLLN-VENSHTSATKkNLMGEVTFEL 469 *****************55.555554444449*****9876 PP >> XP_002966056.1 hypothetical protein SELMODRAFT_407280 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 155.5 0.0 1.9e-48 2.4e-45 1 192 [] 228 431 .. 228 431 .. 0.86 Alignments for each domain: == domain 1 score: 155.5 bits; conditional E-value: 1.9e-48 --------------------------------.....----------....---------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek.....lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIk 76 dw+++++l+ k+gs+f+sps+ta+ + + +k l++ + k av+++yp dl+e L+++dt++rLGi+ F++eIk XP_002966056.1 228 DWQKILKLQSKDGSFFSSPSSTACVYLKTKDKkslqyLQKAM----KnqnyAVSCHYPIDLFESLRVVDTIERLGIDLFFRDEIK 308 7**********************9888444447766554444....445569********************************* PP --------------------.....-----------------------------------------....--------------- CS Terpene_synth_N-terminal 77 eiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlst 152 ++Ld++y+ w++ ++ +e+ d+e++A+aFr+LR+hGy+vs+d+F++F ++f ++ + v+++l LY+As++ + XP_002966056.1 309 AVLDYLYSFWTN-EGIGWEStcivnDIEDTAMAFRILRMHGYSVSPDAFNQFWLPGDKF-CCFVGElphgVSAMLHLYRASQVDF 391 ***********9.667777778999****************************999977.4565555777*************** PP ---------------------------------------- CS Terpene_synth_N-terminal 153 egeeiLeealsFtrkhLkeslseelsdespnlaeeVehaL 192 ++eeiL + ++++ +L + s+++s +++nl+ eV+ +L XP_002966056.1 392 PNEEILTKTFKYSHDYLLNVESSHTSATKKNLMGEVTFEL 431 *****************66433333345559*****9876 PP >> XP_002971433.1 hypothetical protein SELMODRAFT_412135 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 155.2 0.0 2.4e-48 3.1e-45 1 192 [] 113 316 .. 113 316 .. 0.85 Alignments for each domain: == domain 1 score: 155.2 bits; conditional E-value: 2.4e-48 --------------------------------.....----------....---------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek.....lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIk 76 dw+++++l+ k+gs+fnsps+ta+ + + +k l +k++k av+++yp dl+e L+++dt++rLGi+ F++eIk XP_002971433.1 113 DWQKILKLQSKDGSIFNSPSSTACVYLKTKDKkslqyL----QKTMKhqnyAVSCHYPIDLFESLRVVDTIERLGIDLFFRDEIK 193 7**********************988844444775555....5555455569********************************* PP --------------------.....-----------------------------------------....--------------- CS Terpene_synth_N-terminal 77 eiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlst 152 ++Ld++y+ w++ ++ + + d+e++A+aFr LR+hGy+vs+d+F++F ++f ++ + v+++l+LY+As++ + XP_002971433.1 194 AVLDNLYSFWTN-EGIGWGStcivnDIEDTAMAFRTLRMHGYSVSPDAFNQFWLPGDKF-CCFVGElsheVSAMLNLYRASQVDF 276 ***********9.667777788999****************************999977.3444334555*************** PP ---------------------------------------- CS Terpene_synth_N-terminal 153 egeeiLeealsFtrkhLkeslseelsdespnlaeeVehaL 192 ++eeiL + ++++ +L + s+++s +++nl+ eV+ +L XP_002971433.1 277 PNEEILTKTFKYSHDYLLNVESSHTSATKKNLMGEVTFEL 316 *****************66433333345559*****9876 PP >> XP_002971436.1 hypothetical protein SELMODRAFT_412139 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 154.1 0.0 5e-48 6.4e-45 1 192 [] 195 398 .. 195 398 .. 0.85 Alignments for each domain: == domain 1 score: 154.1 bits; conditional E-value: 5e-48 --------------------------------.....----------....---------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek.....lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIk 76 dw+++++l+ k+gslf+sps+ta+ + + +k l +k +k av+++yp dl+e L+++dt++rLGi+ F++eIk XP_002971436.1 195 DWQKILKLQSKDGSLFSSPSSTACVYLKTKDKkslqyL----QKAMKhqnyAVSCHYPIDLFESLRVVDTIERLGIDLFFRDEIK 275 7**********************988844444775555....5555455569********************************* PP --------------------.....-----------------------------------------....--------------- CS Terpene_synth_N-terminal 77 eiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlst 152 ++Ld++y+ w++ ++ + + d+e++A+aFr+LR+hGy+vs+d+F++F ++f ++ + v+++l+LY+As++ + XP_002971436.1 276 AVLDNLYSFWTN-EGIGWGStcivnDIEDTAMAFRILRMHGYSVSPDAFNQFWLPGDKF-CCFVGElsheVSAMLNLYRASQVDF 358 ***********9.667777788999****************************999977.3444334555*************** PP ---------------------------------------- CS Terpene_synth_N-terminal 153 egeeiLeealsFtrkhLkeslseelsdespnlaeeVehaL 192 ++ee+L + ++++ +L + s+++s +++nl+ eV+ +L XP_002971436.1 359 PNEETLTKTFKYSHDYLLNVESSHTSATKKNLMGEVTVEL 398 *****************66433333345559****98766 PP >> XP_002988606.1 hypothetical protein SELMODRAFT_427242 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 152.2 0.0 2e-47 2.5e-44 1 192 [] 289 494 .. 289 494 .. 0.86 Alignments for each domain: == domain 1 score: 152.2 bits; conditional E-value: 2e-47 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw+++++l+ ++gs+++sps+ta+ + ++++ l +k +k avp++yp dl+e L+++dt++rLGi+ F++eI XP_002988606.1 289 DWQKILKLQSRDGSFLSSPSSTACVYL-KTKDrkslqyL----QKAMKdqnyAVPCHYPIDLFESLWVVDTIERLGIDVFFRDEI 368 7**********************8888.55555775555....555555666********************************* PP ---------------------.....-----------------------------------------....-------------- CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshls 151 k++L+++y+sw++ ++ + + d++++A+aFr+LR+hGy+vssd+F++F ++f ++ + v+++l+L++As++ XP_002988606.1 369 KAVLNYVYSSWTN-EGIGWGStclvkDIDDTAMAFRILRMHGYNVSSDAFNQFWLPGDKF-CCFIGEvshgVSEMLNLHRASQID 451 ************9.677787789999****************************999987.4555444677************** PP ----------------------------.---.---------- CS Terpene_synth_N-terminal 152 tegeeiLeealsFtrkhLkeslseelsd.esp.nlaeeVehaL 192 +++eeiL + ++++ +L + s+++++ +++ nl+ eV +L XP_002988606.1 452 FPNEEILTKTFKYSHGYLLNVESSHMDKwAMKkNLMGEVAFEL 494 ******************7744445444655558999998766 PP >> XP_002979298.1 hypothetical protein SELMODRAFT_418910 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 151.0 0.0 4.6e-47 5.9e-44 1 192 [] 288 493 .. 288 493 .. 0.86 Alignments for each domain: == domain 1 score: 151.0 bits; conditional E-value: 4.6e-47 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw+++++l+ ++gs+++sps+ta+ + ++++ l +k ++ avp++yp dl+e L+++dt++rLGi+ F++eI XP_002979298.1 288 DWQKILKLQSRDGSFLSSPSSTACVYL-KTKDrkslqyL----QKAMEdqnyAVPCHYPIDLFESLWVVDTIERLGIDVFFRDEI 367 7**********************8888.55554674444....555556667********************************* PP ---------------------.....-----------------------------------------....-------------- CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshls 151 k++L+++y+sw++ ++ + + d++++A+aFr+LR+hGy+vssd+F++F ++f ++ + v+++l+L++As++ XP_002979298.1 368 KAVLNYVYSSWTN-EGIGWGStclvkDIDDTAMAFRILRMHGYNVSSDAFNQFWLPGDKF-CCFIGEvshgVSEMLNLHRASQID 450 ************9.677787789999****************************999987.4555444677************** PP ----------------------------.---.---------- CS Terpene_synth_N-terminal 152 tegeeiLeealsFtrkhLkeslseelsd.esp.nlaeeVehaL 192 +++eeiL + +++ +L + s+++++ +++ nl+ eV +L XP_002979298.1 451 FPNEEILTKTFKYSDGYLLNVESSHMDKwAMKkNLMGEVAFEL 493 ******************7744445444655558999998766 PP >> XP_002967117.1 terpene synthase, partial [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.2 0.0 8.6 1.1e+04 60 84 .. 237 261 .. 234 267 .. 0.77 2 ! 150.7 0.0 5.7e-47 7.3e-44 1 192 [] 292 497 .. 292 497 .. 0.85 Alignments for each domain: == domain 1 score: -3.2 bits; conditional E-value: 8.6 ------------------------- CS Terpene_synth_N-terminal 60 dtLqrLGisyhFeeeIkeiLdeiyr 84 ++ ++LG++ +e e ++L+ + XP_002967117.1 237 HEAKQLGLDIPYETEFTRLLEISTK 261 5567899999999999999986655 PP == domain 2 score: 150.7 bits; conditional E-value: 5.7e-47 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw+++++l+ k+gs+++sps+ta+ + ++++ l ++ ++ avp++yp dl+e L+++dt++rLGi+ F++eI XP_002967117.1 292 DWQKILKLQSKDGSFLSSPSSTACVYL-KTKDrkslqyL----QNAMEdqnyAVPCHYPIDLFESLWVVDTIERLGIDVFFRDEI 371 7**********************8888.55554674444....555556667********************************* PP ---------------------.....-----------------------------------------....-------------- CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshls 151 k++Ld++y+ w++ ++ + + d++++A+aFr+LR+hGy+vs+d+F++F ++f ++ + v+++l+L++As++ XP_002967117.1 372 KAVLDYVYSFWTN-EGIGWGStclvnDIDDTAMAFRILRMHGYNVSPDAFNQFWLPGDKF-CCFVGElshgVSEMLNLHRASQVD 454 ************9.667787788999****************************999977.4454444566************** PP ----------------------------.---.---------- CS Terpene_synth_N-terminal 152 tegeeiLeealsFtrkhLkeslseelsd.esp.nlaeeVehaL 192 +++e iL + ++++ +L + s ++++ +++ nl+ eV +L XP_002967117.1 455 FPNEAILTKTFKYSHDYLLNVDSAHMDKwATKkNLMGEVAFEL 497 ******************7733334334545558999998766 PP >> XP_002971439.1 hypothetical protein SELMODRAFT_412143 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 148.9 0.0 2.1e-46 2.7e-43 1 192 [] 263 466 .. 263 466 .. 0.85 Alignments for each domain: == domain 1 score: 148.9 bits; conditional E-value: 2.1e-46 --------------------------------.....----------....---------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek.....lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIk 76 dw+++++l+ k+gslf+sps+ta+ + + +k l +k +k av+++yp dl+e +++dt++rLGi+ F++eIk XP_002971439.1 263 DWQKILKLQSKDGSLFSSPSSTACVYLKTKDKkslqyL----QKAMKhqnyAVSCHYPIDLFESSRVVDTIERLGIDLFFRDEIK 343 7**********************988844444775555....5555455569********************************* PP --------------------.....-----------------------------------------....--------------- CS Terpene_synth_N-terminal 77 eiLdeiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlst 152 ++Ld++y+ w++ ++ + + d+e++A+aFr+LR+hGy+vs+d+F++F ++f ++ + v+++l+LY+As++ + XP_002971439.1 344 AVLDNLYSFWTN-EGIGWGStcivnDIEDTAMAFRILRMHGYSVSPDAFNQFWLPGDKF-CCFVGElsheVSAMLNLYRASQVDF 426 ***********9.667777788999****************************999977.3444334555*************** PP ---------------------------------------- CS Terpene_synth_N-terminal 153 egeeiLeealsFtrkhLkeslseelsdespnlaeeVehaL 192 ++ee+L + ++++ +L + s+++s +++nl+ eV+ +L XP_002971439.1 427 PNEETLTKTFKYSHDYLLNVESSHTSATKKNLMGEVTLEL 466 *****************66433333345559***998765 PP >> XP_002960234.1 terpene synthase [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 148.1 0.0 3.6e-46 4.7e-43 1 173 [. 406 586 .. 406 607 .. 0.86 Alignments for each domain: == domain 1 score: 148.1 bits; conditional E-value: 3.6e-46 --------------------------------...----------..-------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek...lkeevrkllk..avpavypkdleekLelidtLqrLGisyhFeeeIkeiLd 80 dw+++++l+ k+gs+++sps+ta+ + ++++ l + + ++ avp++yp dl+e L+++dt++rLGi+ F++eIk++Ld XP_002960234.1 406 DWQEILKLQSKDGSFLSSPSSTACVYL-KTKDrksL--QYAMQVQnyAVPCHYPIDLFESLWVVDTIERLGIDVFFRDEIKAVLD 487 7**********************9888.55553443..3333344678************************************* PP ----------------.....-----------------------------------------....------------------- CS Terpene_synth_N-terminal 81 eiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlstegee 156 ++y+ w++ ++ + + d++++A+aFr+LR+hGy+vs+d+F++F ++f ++ + v+++l+L++As++ +++e+ XP_002960234.1 488 YVYSFWTN-EGIGWGStclvnDIDDTAMAFRILRMHGYNVSPDAFDQFWLPRDKF-CCFVGElshgVSEMLNLHRASQVDFPNET 570 *******9.667787788999****************************999977.4444444566******************* PP ----------------- CS Terpene_synth_N-terminal 157 iLeealsFtrkhLkesl 173 iL + ++++ +L + + XP_002960234.1 571 ILTKTFKYSHDYLLN-V 586 *************55.2 PP >> XP_002964746.1 ent-kaurene synthase [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 74.3 0.0 1.5e-23 1.9e-20 2 156 .. 237 385 .. 236 392 .. 0.77 Alignments for each domain: == domain 1 score: 74.3 bits; conditional E-value: 1.5e-23 -------------------------------......------------------------------------------------ CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaek......lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLd 80 w++ + ++ ++gslf s + ta+a++ ++++ l + ll++ + +k+l++ L+l+d L++LGi++ Fe++I+++L XP_002964746.1 237 WQHLLRYQSSSGSLF-SVTLTACAYM-HTGDrkclrfL----NGLLEGPLTKPNKNLSQLLRLVDWLEHLGIERFFEKDIEQTLI 315 9************87.88899999**.88876874444....888874444344555599************************* PP ---------.-------...------------------------------------------------------------ CS Terpene_synth_N-terminal 81 eiyrsweek.kseeeed...dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegee 156 +++r w + ++ +++ + e+ Al Fr+LR hGy+vs+dv+++ + f + +++l +L Ash+ +++e+ XP_002964746.1 316 QAFRFWRGNaAGSGSQQhlkSFEDSALLFRILRRHGYEVSPDVLHQRT-----F--CE---TRDLKELSLASHFLFPSES 385 *******98633333336789**********************98532.....3..33...4455556667777776665 PP >> XP_002961679.1 hypothetical protein SELMODRAFT_403761 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 73.3 0.0 2.9e-23 3.8e-20 2 156 .. 435 583 .. 434 591 .. 0.77 Alignments for each domain: == domain 1 score: 73.3 bits; conditional E-value: 2.9e-23 -------------------------------......------------------------------------------------ CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaek......lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLd 80 w++ + ++ ++gslf s + ta+a++ ++++ l + ll++ + +k+l++ L+lid L++LGi++ Fe++I+++L XP_002961679.1 435 WQRLLRYQSSSGSLF-SVTLTACAYM-HTGDrkclrfL----NGLLEGPLTKPNKNLSQLLRLIDWLEHLGIERFFEKDIEQTLI 513 99999********87.88899999**.88876874444....888874444344555599************************* PP ---------.-------....------------------------------------------------------------ CS Terpene_synth_N-terminal 81 eiyrsweek.kseeeed....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegee 156 +++r w + ++ + + e+ Al Fr+LR hGy+vs+dv+++ + f + +++l +L Ash+ +++e+ XP_002961679.1 514 QAFRFWRGNaAGSGR-QqhlkSFEDSALLFRILRRHGYEVSPDVLHQRT-----F--CE---TRDLKELSLASHFLFPSES 583 *******98533333.2468899*********************98532.....3..33...4555566667777777776 PP >> XP_002967480.1 hypothetical protein SELMODRAFT_86646, partial [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 59.3 0.0 5.8e-19 7.4e-16 1 86 [. 27 117 .. 27 121 .. 0.87 Alignments for each domain: == domain 1 score: 59.3 bits; conditional E-value: 5.8e-19 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw+++++l+ k+gs+++s s+ta+ + ++++ l ++ ++ avp++yp dl+e L++idt++rLGi+ F++eI XP_002967480.1 27 DWQKILKLQSKDGSFLSSLSSTACVYL-KTKDrkslqyL----QNAMEdqnyAVPCHYPIDLFESLWVIDTIERLGIDVFFRDEI 106 7**********************8888.55554674444....555556667********************************* PP ----------- CS Terpene_synth_N-terminal 76 keiLdeiyrsw 86 k++Ld++yr++ XP_002967480.1 107 KAVLDYVYRYN 117 ********974 PP >> XP_002961681.1 terpene synthase [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 52.8 0.0 5.9e-17 7.6e-14 2 120 .. 235 359 .. 234 382 .. 0.79 2 ? -1.7 0.0 3 3.9e+03 112 135 .. 457 480 .. 455 515 .. 0.72 Alignments for each domain: == domain 1 score: 52.8 bits; conditional E-value: 5.9e-17 -------------------------------......----------.....--------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaek......lkeevrkllk.....avpavypkdleekLelidtLqrLGisyhFeeeI 75 w++ + ++ + gslf s + ta+a++ ++++ l + +l+ ++++ l++ L+l + L++LGi++ Fe+eI XP_002961681.1 235 WQHLLRYQSSGGSLF-SVTLTACAYM-HTGDkkclrfL----NGVLEgpltkPNKNRHFRGLSQLLRLAEWLEHLGIERFFEKEI 313 999999999999987.88899999**.66665876554....555545554322233334455789******************* PP ---------------------..------------------------ CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed..dletvAlaFrLLRqhGydvssdvF 120 +++L +++r + +++++ + + ++ Al Fr+LR hGy+vs+ + XP_002961681.1 314 EQTLIQAFRGNAAGSGSQK-HleSFKDSALLFRILRRHGYEVSPGCL 359 ********99887643332.2469*******************9765 PP == domain 2 score: -1.7 bits; conditional E-value: 3 ------------------------ CS Terpene_synth_N-terminal 112 GydvssdvFkkFkdeegnfkesls 135 Gy ++dvF+ F+ + f+ +ls XP_002961681.1 457 GYARQKDVFCVFTAAATMFQPELS 480 777788999999998888877665 PP >> XP_002961682.1 hypothetical protein SELMODRAFT_77019 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 49.4 0.0 6.3e-16 8.1e-13 49 113 .. 32 101 .] 2 101 .] 0.79 Alignments for each domain: == domain 1 score: 49.4 bits; conditional E-value: 6.3e-16 -----.------------------------------------...-------....----------------- CS Terpene_synth_N-terminal 49 pkdle.ekLelidtLqrLGisyhFeeeIkeiLdeiyrsweek...kseeeed....dletvAlaFrLLRqhGy 113 p+ + L+l+d L++LG+++ Fe+eIk++ +++r+w+ + + + + + e+ Al F++LR hGy XP_002961682.1 32 PNRHLsQLLQLVDWLEHLGMERFFEKEIKQTVVKAFRCWKGNaagT--GS-QkhleSFEDAALLFQILRRHGY 101 44444388********************************986431..22.236789***************9 PP >> XP_002964748.1 hypothetical protein SELMODRAFT_82917, partial [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.6 0.0 9.4e-15 1.2e-11 58 113 .. 1 60 [] 1 60 [] 0.88 Alignments for each domain: == domain 1 score: 45.6 bits; conditional E-value: 9.4e-15 --------------------------------.-------....----------------- CS Terpene_synth_N-terminal 58 lidtLqrLGisyhFeeeIkeiLdeiyrsweek.kseeeed....dletvAlaFrLLRqhGy 113 l+d L++LGi++ F++ I+++L +++r+w+ + + + + e+ Al Fr+LR hGy XP_002964748.1 1 LVDWLEHLGIERFFRKGIEQTLIQAFRCWKGNaAGTGR-QkhleSFEDAALLFRILRRHGY 60 79****************************98532222.246889***************9 PP >> XP_002964747.1 hypothetical protein SELMODRAFT_406216 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.9 0.0 1.7e-07 0.00022 2 85 .. 235 323 .. 234 335 .. 0.77 2 ? -1.9 0.0 3.3 4.3e+03 112 135 .. 423 446 .. 421 481 .. 0.72 Alignments for each domain: == domain 1 score: 21.9 bits; conditional E-value: 1.7e-07 -------------------------------......----------.....--------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaek......lkeevrkllk.....avpavypkdleekLelidtLqrLGisyhFeeeI 75 w++ + ++ + gslf s + ta+a++ ++++ l + +l+ ++++ l++ L+l + L++LGi++ Fe+eI XP_002964747.1 235 WQHLLRYQSSGGSLF-SVTLTACAYM-HTGDkkclrfL----NGVLEgpltkPNKNRHFRGLSQLLRLAEWLEHLGIERFFEKEI 313 999999999999987.88899999**.66665876554....555545554322233334455789******************* PP ---------- CS Terpene_synth_N-terminal 76 keiLdeiyrs 85 +++L +++r+ XP_002964747.1 314 EQTLIQAFRY 323 ****999986 PP == domain 2 score: -1.9 bits; conditional E-value: 3.3 ------------------------ CS Terpene_synth_N-terminal 112 GydvssdvFkkFkdeegnfkesls 135 Gy ++dvF+ F+ + f+ +ls XP_002964747.1 423 GYARQKDVFCVFTAAATMFQPELS 446 777788999999998888877665 PP >> XP_002986818.1 hypothetical protein SELMODRAFT_158239 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.2 0.0 0.00034 0.43 35 73 .. 191 229 .. 167 246 .. 0.73 Alignments for each domain: == domain 1 score: 11.2 bits; conditional E-value: 0.00034 --------.------------------------------- CS Terpene_synth_N-terminal 35 eevrkllk.avpavypkdleekLelidtLqrLGisyhFee 73 e l + +vp+ ++ ++++l d+L r+G++++F+ XP_002986818.1 191 EWLAALYSaGVPC-AVASTLDRISLLDALVRMGLDKYFQA 229 3344444466776.3356669*****************86 PP >> XP_002969297.1 hypothetical protein SELMODRAFT_146341 [Selaginella moellendorffii] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.2 0.0 0.00034 0.43 35 73 .. 191 229 .. 167 246 .. 0.73 Alignments for each domain: == domain 1 score: 11.2 bits; conditional E-value: 0.00034 --------.------------------------------- CS Terpene_synth_N-terminal 35 eevrkllk.avpavypkdleekLelidtLqrLGisyhFee 73 e l + +vp+ ++ ++++l d+L r+G++++F+ XP_002969297.1 191 EWLAALYSaGVPC-AVASTLDRISLLDALVRMGLDKYFQA 229 3344444466776.3356669*****************86 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (192 nodes) Target sequences: 34746 (13673890 residues) Passed MSV filter: 1231 (0.0354285); expected 694.9 (0.02) Passed bias filter: 763 (0.0219594); expected 694.9 (0.02) Passed Vit filter: 72 (0.00207218); expected 34.7 (0.001) Passed Fwd filter: 27 (0.000777068); expected 0.3 (1e-05) Initial search space (Z): 34746 [actual number of targets] Domain search space (domZ): 27 [number of targets reported over threshold] # CPU time: 0.66u 0.05s 00:00:00.70 Elapsed: 00:00:00.19 # Mc/sec: 13394.83 //